Shivam's paper is published in Computational Biology and Chemistry Journal.
- complex analysis
- Nov 29
- 1 min read
Shivam's paper titled "Introducing feature identification and refinement engine (FIRE) for identifying consistent and informative gene signature" is published in Computational Biology and Chemistry Journal. Identifying disease-specific molecular signatures from omics data remains a major challenge in biomedical research. In the case of glioblastoma, one of the most aggressive forms of brain tumors, clinical management is complicated by molecular heterogeneity and the lack of a consistent, reproducible signature. Despite extensive research, many studies fall short due to high data variance and complex biological patterns. To address this critical gap, we present FIRE ( Feature Identification and Refinement Engine ), a novel machine learning( ML )-driven framework designed for integrative analysis and feature refinement. FIRE incorporates data merging and an ensemble ML approach capable of detecting both linear and non-linear patterns across diverse datasets. This enables robust extraction of biologically meaningful features for complex, heterogeneous omics data. Applying FIRE to glioblastoma datasets , we identified 33 genes that consistently distinguish glioblastoma from control samples. A literature survey further revealed several of these genes associated with established cancer hallmarks. The robustness of FIRE was established through repeated cross-validation across multiple independent datasets, demonstrating superior predictive performance compared to existing glioblastoma signatures, projecting it as a promising tool applicable to other diseases.

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