Computational and Mathematical Biology Centre
Our Tools
Here is an advanced, indigenously developed web-based platform designed by Dr. Samrat Chatterjee and his team.
1.
Konnect2Prot 1.0
Protein-protein interactions are central to understanding the functional relationship between proteins. We have curated the available information and augmented with context-specific analysis to ease your research journey.
Konnect2Prot 2.0
2.
konnect2prot 2.0 is an advanced, indigenously developed web-based platform designed by Dr. Samrat Chatterjee and his team. It takes protein analysis to the next level with a suite of robust analysis and enrichment tools. Built to cater to the needs of modern biological research, this version extends the core functionality of network generation with additional features for in-depth investigation of biological pathways, protein-protein interactions (PPIs), and functional enrichment.
3.
TCGAimmunosurv (R package)
We developed a pan-cancer R package called TCGAimmunosurv that integrates bulk RNA-Seq data from The Cancer Genome Atlas (TCGA) with scRNA-Seq data to identify the genes to investigate mutation-specific immune dynamics.
Key points
📍 Preloaded datasets, preprocessing, and visualization tools for analysis
📍 Mutation-specific survival analysis
📍 Immune-cell-specific pseudotime trajectory analysis